Native apps have privileged access to far more personal data on your device. A website has, what, cookies and fingerprinting? You can already mitigate this on Firefox but even if not, it isn't in the same league
Geolocation sharing can be disabled as reflected in your source. Everything else you linked to is trivial, but notwithstanding, it all relies on JS which, as I already said, can be disabled. Oh, and many aren't even available in Firefox: https://developer.mozilla.org/en-US/docs/Web/API/Battery_Sta...
> What information do you think apps have without your permissions that websites don’t?
Your actual personal information. Access to photos, messages, metadata (name, address, contacts, notes, metadata, habits).