Heh, gotta love boot-strapping! Like the C compiler that's written in C... At BARD Tracker, we used BARD Tracker to track features and bugs for BARD Tracker, aka, "dog-fooding". We are very happy with the results! It's proving to be an invaluable tool while we continue to build and develop it. :)
Oh ya know, a spreadsheet or a to-do list. The first feature you implement when making a tool like this is tracking your own stuff in it. The tool has to be able to iterate on itself.