https://secure.wikimedia.org/wikipedia/en/wiki/Focus_stackin...
One can put a diffractive optical element infront of the sensor and obtain 25 instantaneous images, each at a different depth.
http://waf.eps.hw.ac.uk/research/live_cell_imaging.html
Couple this with high resolution techniques and your at the current research front and could possibly solve the question:
What happens in a synapse?
It is theoretically possible to image at 40nm resolution with 100fps and therefore see the transport of vesicles.
One can expect important discoveries on how the brain works using these techniques.
https://secure.wikimedia.org/wikipedia/en/wiki/Focus_stackin...